No. words: 1789; after pruning: 1763


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.0 (1,1:1110)  652  0.15 0.00 0.00  BE591258As01P026H09P026D121F1_044.ab1      206   883 (0)  C BE591258As01P026H09P026D121R1_044.ab1   (0)   906   229 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  338 nodes

 171 str. conn. components

Path
    1    BE591258As01P026H09P026D121F1_044.ab1     1 
  445  C BE591258As01P026H09P026D121R1_044.ab1   667 
  453    BE591258As01P026H09P026D121F1_044.ab1   453 
  469  C BE591258As01P026H09P026D121R1_044.ab1   643 
  473    BE591258As01P026H09P026D121F1_044.ab1   473 
  517  C BE591258As01P026H09P026D121R1_044.ab1   595 
  537    BE591258As01P026H09P026D121F1_044.ab1   537 
  549  C BE591258As01P026H09P026D121R1_044.ab1   563 
  585    BE591258As01P026H09P026D121F1_044.ab1   585 
  589  C BE591258As01P026H09P026D121R1_044.ab1   523 
  597    BE591258As01P026H09P026D121F1_044.ab1   597 
  601  C BE591258As01P026H09P026D121R1_044.ab1   511 
Contig length: old 1111, new 1111

Contig length: old 1111, new 1111
New start: 0