No. words: 1851; after pruning: 1825


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.7 (1,1:1062)  747  0.38 0.00 0.13  BE591258At01P026H09P026D121F1_040.ab1       92   879 (0)  C BE591258At01P026H09P026D121R1_040.ab1   (0)   972   186 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  380 nodes

 192 str. conn. components

Path
    1    BE591258At01P026H09P026D121F1_040.ab1     1 
  449  C BE591258At01P026H09P026D121R1_040.ab1   615 
  479    BE591258At01P026H09P026D121F1_040.ab1   479 
  539  C BE591258At01P026H09P026D121R1_040.ab1   525 
  663    BE591258At01P026H09P026D121F1_040.ab1   663 
  671  C BE591258At01P026H09P026D121R1_040.ab1   393 
  687    BE591258At01P026H09P026D121F1_040.ab1   687 
  695  C BE591258At01P026H09P026D121R1_040.ab1   369 
Contig length: old 1063, new 1063

Contig length: old 1063, new 1063
New start: 0