No. words: 1803; after pruning: 1763


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:1317)  459  0.41 0.21 0.00  BE591258Tu01P026H09P026D121F1_048.ab1      456   939 (0)  C BE591258Tu01P026H09P026D121R1_048.ab1   (0)   864   380 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1    BE591258Tu01P026H09P026D121F1_048.ab1     1 
  692  C BE591258Tu01P026H09P026D121R1_048.ab1   627 
  700    BE591258Tu01P026H09P026D121F1_048.ab1   700 
  704  C BE591258Tu01P026H09P026D121R1_048.ab1   615 
  728    BE591258Tu01P026H09P026D121F1_048.ab1   728 
  744  C BE591258Tu01P026H09P026D121R1_048.ab1   575 
Contig length: old 1318, new 1318

Contig length: old 1318, new 1318
New start: 0