No. words: 1184; after pruning: 1144


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:446)  426  0.22 0.00 0.45  BE591466Ld03P026A10P026E121F1_064.ab1        1   448 (142)  C BE591466Ld03P026A10P026E121R1_064.ab1   (148)   446     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  218 nodes

 111 str. conn. components

Path
    1  C BE591466Ld03P026A10P026E121R1_064.ab1   594 
  224    BE591466Ld03P026A10P026E121F1_064.ab1    76 
  232  C BE591466Ld03P026A10P026E121R1_064.ab1   363 
  248    BE591466Ld03P026A10P026E121F1_064.ab1   100 
  252  C BE591466Ld03P026A10P026E121R1_064.ab1   343 
  260    BE591466Ld03P026A10P026E121F1_064.ab1   112 
  288  C BE591466Ld03P026A10P026E121R1_064.ab1   307 
  296    BE591466Ld03P026A10P026E121F1_064.ab1   148 
  300  C BE591466Ld03P026A10P026E121R1_064.ab1   295 
  312    BE591466Ld03P026A10P026E121F1_064.ab1   164 
  324  C BE591466Ld03P026A10P026E121R1_064.ab1   271 
  580    BE591466Ld03P026A10P026E121F1_064.ab1   432 
Contig length: old 737, new 738

Contig length: old 738, new 738
New start: 0