No. words: 1147; after pruning: 1121


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:436)  425  0.00 0.00 0.00  BE591466Ld07P026A10P026E121F1_056.ab1        1   437 (128)  C BE591466Ld07P026A10P026E121R1_056.ab1   (145)   437     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BE591466Ld07P026A10P026E121R1_056.ab1   582 
  213    BE591466Ld07P026A10P026E121F1_056.ab1    68 
  217  C BE591466Ld07P026A10P026E121R1_056.ab1   366 
  385    BE591466Ld07P026A10P026E121F1_056.ab1   240 
  405  C BE591466Ld07P026A10P026E121R1_056.ab1   178 
  537    BE591466Ld07P026A10P026E121F1_056.ab1   392 
  545  C BE591466Ld07P026A10P026E121R1_056.ab1    38 
  569    BE591466Ld07P026A10P026E121F1_056.ab1   424 
Contig length: old 710, new 710

Contig length: old 710, new 710
New start: 0