No. words: 1192; after pruning: 1166


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.4 (1,1:433)  417  0.00 0.00 0.23  BE591466Ld08P026A10P026E121F1_054.ab1        1   434 (148)  C BE591466Ld08P026A10P026E121R1_054.ab1   (177)   433     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  216 nodes

 110 str. conn. components

Path
    1  C BE591466Ld08P026A10P026E121R1_054.ab1   610 
  261    BE591466Ld08P026A10P026E121F1_054.ab1    84 
  269  C BE591466Ld08P026A10P026E121R1_054.ab1   342 
  413    BE591466Ld08P026A10P026E121F1_054.ab1   236 
  429  C BE591466Ld08P026A10P026E121R1_054.ab1   182 
  469    BE591466Ld08P026A10P026E121F1_054.ab1   292 
  473  C BE591466Ld08P026A10P026E121R1_054.ab1   138 
  497    BE591466Ld08P026A10P026E121F1_054.ab1   320 
  509  C BE591466Ld08P026A10P026E121R1_054.ab1   102 
  513    BE591466Ld08P026A10P026E121F1_054.ab1   336 
  533  C BE591466Ld08P026A10P026E121R1_054.ab1    78 
  565    BE591466Ld08P026A10P026E121F1_054.ab1   388 
Contig length: old 758, new 759

Contig length: old 759, new 759
New start: 0