No. words: 1314; after pruning: 1288


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0    0.0 0.3 (1,1:1274)   29  0.00 2.56 2.56  BE591575Ld01P026B10P026F121F1_040.ab1      616   654 (0)  C BE591575Ld01P026B10P026F121R1_040.ab1   (0)   660   622 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  16 nodes

 10 str. conn. components

Path
    1    BE591575Ld01P026B10P026F121F1_040.ab1     1 
  627  C BE591575Ld01P026B10P026F121R1_040.ab1   649 
  635    BE591575Ld01P026B10P026F121F1_040.ab1   635 
  649  C BE591575Ld01P026B10P026F121R1_040.ab1   627 
Contig length: old 1275, new 1275

Contig length: old 1275, new 1275
New start: 0