No. words: 1278; after pruning: 1252


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 11.0 (1,1:599)  579  0.00 0.34 0.00  BE591684As02P078F03P078F091F1_095.ab1        8   599 (43)  C BE591684As02P078F03P078F091R1_095.ab1   (42)   594     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BE591684As02P078F03P078F091R1_095.ab1   636 
   93    BE591684As02P078F03P078F091F1_095.ab1    56 
  109  C BE591684As02P078F03P078F091R1_095.ab1   528 
  113    BE591684As02P078F03P078F091F1_095.ab1    76 
  117  C BE591684As02P078F03P078F091R1_095.ab1   520 
  129    BE591684As02P078F03P078F091F1_095.ab1    92 
  133  C BE591684As02P078F03P078F091R1_095.ab1   504 
  149    BE591684As02P078F03P078F091F1_095.ab1   112 
  153  C BE591684As02P078F03P078F091R1_095.ab1   484 
  169    BE591684As02P078F03P078F091F1_095.ab1   132 
  177  C BE591684As02P078F03P078F091R1_095.ab1   460 
  193    BE591684As02P078F03P078F091F1_095.ab1   156 
  225  C BE591684As02P078F03P078F091R1_095.ab1   412 
  265    BE591684As02P078F03P078F091F1_095.ab1   228 
  285  C BE591684As02P078F03P078F091R1_095.ab1   352 
  297    BE591684As02P078F03P078F091F1_095.ab1   260 
  309  C BE591684As02P078F03P078F091R1_095.ab1   328 
  317    BE591684As02P078F03P078F091F1_095.ab1   280 
  325  C BE591684As02P078F03P078F091R1_095.ab1   312 
  349    BE591684As02P078F03P078F091F1_095.ab1   312 
  373  C BE591684As02P078F03P078F091R1_095.ab1   264 
  381    BE591684As02P078F03P078F091F1_095.ab1   344 
  385  C BE591684As02P078F03P078F091R1_095.ab1   252 
  393    BE591684As02P078F03P078F091F1_095.ab1   356 
  409  C BE591684As02P078F03P078F091R1_095.ab1   228 
  421    BE591684As02P078F03P078F091F1_095.ab1   384 
  433  C BE591684As02P078F03P078F091R1_095.ab1   204 
  513    BE591684As02P078F03P078F091F1_095.ab1   476 
  517  C BE591684As02P078F03P078F091R1_095.ab1   120 
  533    BE591684As02P078F03P078F091F1_095.ab1   496 
  545  C BE591684As02P078F03P078F091R1_095.ab1    92 
  561    BE591684As02P078F03P078F091F1_095.ab1   524 
  565  C BE591684As02P078F03P078F091R1_095.ab1    72 
  589    BE591684As02P078F03P078F091F1_095.ab1   552 
  597  C BE591684As02P078F03P078F091R1_095.ab1    40 
  621    BE591684As02P078F03P078F091F1_095.ab1   584 
Contig length: old 678, new 679

Contig length: old 679, new 679
New start: 0