No. words: 1115; after pruning: 1075


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 8.0 (1,1:515)  472  1.38 0.39 0.20  BE591684At01P078F03P078F091F1_093.ab1        9   516 (44)  C BE591684At01P078F03P078F091R1_093.ab1   (46)   509     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BE591684At01P078F03P078F091R1_093.ab1   555 
   62    BE591684At01P078F03P078F091F1_093.ab1    23 
   66  C BE591684At01P078F03P078F091R1_093.ab1   490 
   82    BE591684At01P078F03P078F091F1_093.ab1    42 
  146  C BE591684At01P078F03P078F091R1_093.ab1   410 
  150    BE591684At01P078F03P078F091F1_093.ab1   110 
  214  C BE591684At01P078F03P078F091R1_093.ab1   342 
  226    BE591684At01P078F03P078F091F1_093.ab1   186 
  238  C BE591684At01P078F03P078F091R1_093.ab1   318 
  242    BE591684At01P078F03P078F091F1_093.ab1   202 
  318  C BE591684At01P078F03P078F091R1_093.ab1   238 
  326    BE591684At01P078F03P078F091F1_093.ab1   286 
  485  C BE591684At01P078F03P078F091R1_093.ab1    71 
  510    BE591684At01P078F03P078F091F1_093.ab1   470 
Contig length: old 599, new 600

Contig length: old 600, new 600
New start: 0