No. words: 1370; after pruning: 1344


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.4 (1,1:527)  511  0.00 0.19 0.19  BE591684Ld07P078F03P078F091F1_049.ab1        4   527 (174)  C BE591684Ld07P078F03P078F091R1_049.ab1   (144)   525     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1  C BE591684Ld07P078F03P078F091R1_049.ab1   669 
  199    BE591684Ld07P078F03P078F091F1_049.ab1    57 
  203  C BE591684Ld07P078F03P078F091R1_049.ab1   467 
  563    BE591684Ld07P078F03P078F091F1_049.ab1   421 
  603  C BE591684Ld07P078F03P078F091R1_049.ab1    67 
  615    BE591684Ld07P078F03P078F091F1_049.ab1   473 
  623  C BE591684Ld07P078F03P078F091R1_049.ab1    47 
  627    BE591684Ld07P078F03P078F091F1_049.ab1   485 
  635  C BE591684Ld07P078F03P078F091R1_049.ab1    35 
  647    BE591684Ld07P078F03P078F091F1_049.ab1   505 
Contig length: old 842, new 843

Contig length: old 843, new 843
New start: 0