No. words: 1378; after pruning: 1352


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    8    0.0 9.3 (1,1:537)  524  0.00 0.00 0.00  BE591684Ld13P078F03P078F091F1_087.ab1        9   536 (171)  C BE591684Ld13P078F03P078F091R1_087.ab1   (141)   530     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1  C BE591684Ld13P078F03P078F091R1_087.ab1   671 
  569    BE591684Ld13P078F03P078F091F1_087.ab1   436 
  625  C BE591684Ld13P078F03P078F091R1_087.ab1    47 
  629    BE591684Ld13P078F03P078F091F1_087.ab1   496 
Contig length: old 840, new 840

Contig length: old 840, new 840
New start: 0