No. words: 666; after pruning: 640


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.8 -0.8 (1,1:145)  109  7.53 0.00 0.00  BE591684Sn28P095D10P078F091F1_025.ab1        1   146 (58)  C BE591684Sn28P095D10P078F091R1_025.ab1   (316)   146     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.8       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  44 nodes

 24 str. conn. components

Path
    1  C BE591684Sn28P095D10P078F091R1_025.ab1   462 
  391    BE591684Sn28P095D10P078F091F1_025.ab1    75 
  401  C BE591684Sn28P095D10P078F091R1_025.ab1    62 
  421    BE591684Sn28P095D10P078F091F1_025.ab1   105 
  429  C BE591684Sn28P095D10P078F091R1_025.ab1    34 
  440    BE591684Sn28P095D10P078F091F1_025.ab1   124 
  448  C BE591684Sn28P095D10P078F091R1_025.ab1    15 
  452    BE591684Sn28P095D10P078F091F1_025.ab1   136 
Contig length: old 520, new 520

Contig length: old 520, new 520
New start: 0 
S Change at: 459; seg lengths: entry 1, contig 1