No. words: 1108; after pruning: 1068


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.6 (1,1:513)  491  0.39 0.39 0.00  BE591684Tu02P078F03P078F091F1_068.ab1        6   513 (44)  C BE591684Tu02P078F03P078F091R1_068.ab1   (41)   510     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE591684Tu02P078F03P078F091R1_068.ab1   551 
   84    BE591684Tu02P078F03P078F091F1_068.ab1    46 
   88  C BE591684Tu02P078F03P078F091R1_068.ab1   464 
   92    BE591684Tu02P078F03P078F091F1_068.ab1    54 
  108  C BE591684Tu02P078F03P078F091R1_068.ab1   444 
  112    BE591684Tu02P078F03P078F091F1_068.ab1    74 
  116  C BE591684Tu02P078F03P078F091R1_068.ab1   436 
  124    BE591684Tu02P078F03P078F091F1_068.ab1    86 
  136  C BE591684Tu02P078F03P078F091R1_068.ab1   416 
  172    BE591684Tu02P078F03P078F091F1_068.ab1   134 
  184  C BE591684Tu02P078F03P078F091R1_068.ab1   368 
  192    BE591684Tu02P078F03P078F091F1_068.ab1   154 
  208  C BE591684Tu02P078F03P078F091R1_068.ab1   344 
  228    BE591684Tu02P078F03P078F091F1_068.ab1   190 
  232  C BE591684Tu02P078F03P078F091R1_068.ab1   320 
  240    BE591684Tu02P078F03P078F091F1_068.ab1   202 
  248  C BE591684Tu02P078F03P078F091R1_068.ab1   304 
  252    BE591684Tu02P078F03P078F091F1_068.ab1   214 
  272  C BE591684Tu02P078F03P078F091R1_068.ab1   280 
  280    BE591684Tu02P078F03P078F091F1_068.ab1   242 
  284  C BE591684Tu02P078F03P078F091R1_068.ab1   268 
  296    BE591684Tu02P078F03P078F091F1_068.ab1   258 
  304  C BE591684Tu02P078F03P078F091R1_068.ab1   248 
  308    BE591684Tu02P078F03P078F091F1_068.ab1   270 
  312  C BE591684Tu02P078F03P078F091R1_068.ab1   240 
  324    BE591684Tu02P078F03P078F091F1_068.ab1   286 
  344  C BE591684Tu02P078F03P078F091R1_068.ab1   208 
  352    BE591684Tu02P078F03P078F091F1_068.ab1   314 
  376  C BE591684Tu02P078F03P078F091R1_068.ab1   176 
  380    BE591684Tu02P078F03P078F091F1_068.ab1   342 
  384  C BE591684Tu02P078F03P078F091R1_068.ab1   168 
  388    BE591684Tu02P078F03P078F091F1_068.ab1   350 
  400  C BE591684Tu02P078F03P078F091R1_068.ab1   152 
  416    BE591684Tu02P078F03P078F091F1_068.ab1   378 
  420  C BE591684Tu02P078F03P078F091R1_068.ab1   132 
  428    BE591684Tu02P078F03P078F091F1_068.ab1   390 
  460  C BE591684Tu02P078F03P078F091R1_068.ab1    92 
  476    BE591684Tu02P078F03P078F091F1_068.ab1   438 
  480  C BE591684Tu02P078F03P078F091R1_068.ab1    72 
  509    BE591684Tu02P078F03P078F091F1_068.ab1   471 
  513  C BE591684Tu02P078F03P078F091R1_068.ab1    39 
  537    BE591684Tu02P078F03P078F091F1_068.ab1   499 
Contig length: old 594, new 595

Contig length: old 595, new 595
New start: 0