No. words: 1494; after pruning: 1454


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:1096)  376  1.01 0.00 0.00  BE591948At02P026D10P026H121F1_052.ab1      303   699 (0)  C BE591948At02P026D10P026H121R1_052.ab1   (0)   795   399 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1    BE591948At02P026D10P026H121F1_052.ab1     1 
  437  C BE591948At02P026D10P026H121R1_052.ab1   661 
  447    BE591948At02P026D10P026H121F1_052.ab1   447 
  561  C BE591948At02P026D10P026H121R1_052.ab1   537 
  569    BE591948At02P026D10P026H121F1_052.ab1   569 
  577  C BE591948At02P026D10P026H121R1_052.ab1   521 
Contig length: old 1097, new 1097

Contig length: old 1097, new 1097
New start: 0