No. words: 1449; after pruning: 1423


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 5.1 (1,1:1096)  333  0.00 0.29 0.00  BE591948Ld03P026D10P026H121F1_056.ab1      375   722 (0)  C BE591948Ld03P026D10P026H121R1_056.ab1   (3)   724   376 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  172 nodes

 88 str. conn. components

Path
    1    BE591948Ld03P026D10P026H121F1_056.ab1     1 
  526  C BE591948Ld03P026D10P026H121R1_056.ab1   573 
  534    BE591948Ld03P026D10P026H121F1_056.ab1   534 
  550  C BE591948Ld03P026D10P026H121R1_056.ab1   549 
  566    BE591948Ld03P026D10P026H121F1_056.ab1   566 
  570  C BE591948Ld03P026D10P026H121R1_056.ab1   529 
  578    BE591948Ld03P026D10P026H121F1_056.ab1   578 
  582  C BE591948Ld03P026D10P026H121R1_056.ab1   517 
Contig length: old 1097, new 1098

Contig length: old 1098, new 1098
New start: 0