No. words: 1182; after pruning: 1156


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.0 (1,1:1087)   79  4.26 0.00 0.00  BE591948Ld06P026D10P026H121F1_050.ab1      497   590 (0)  C BE591948Ld06P026D10P026H121R1_050.ab1   (0)   592   499 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  38 nodes

 21 str. conn. components

Path
    1    BE591948Ld06P026D10P026H121F1_050.ab1     1 
  551  C BE591948Ld06P026D10P026H121R1_050.ab1   538 
  555    BE591948Ld06P026D10P026H121F1_050.ab1   555 
  570  C BE591948Ld06P026D10P026H121R1_050.ab1   519 
  574    BE591948Ld06P026D10P026H121F1_050.ab1   574 
  586  C BE591948Ld06P026D10P026H121R1_050.ab1   503 
Contig length: old 1088, new 1088

Contig length: old 1088, new 1088
New start: 0