No. words: 1526; after pruning: 1500


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.6 (1,1:1101)  391  1.89 0.00 0.00  BE591948Tu01P026D10P026H121F1_060.ab1      316   739 (0)  C BE591948Tu01P026D10P026H121R1_060.ab1   (0)   787   364 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  194 nodes

 99 str. conn. components

Path
    1    BE591948Tu01P026D10P026H121F1_060.ab1     1 
  563  C BE591948Tu01P026D10P026H121R1_060.ab1   540 
  567    BE591948Tu01P026D10P026H121F1_060.ab1   567 
  579  C BE591948Tu01P026D10P026H121R1_060.ab1   524 
Contig length: old 1102, new 1102

Contig length: old 1102, new 1102
New start: 0 
S Change at: 449; seg lengths: entry 2, contig 2