No. words: 1603; after pruning: 1563


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.5 (1,1:1104)  478  0.60 0.00 0.00  BE591948Tu02P026D10P026H121F1_058.ab1      293   790 (0)  C BE591948Tu02P026D10P026H121R1_058.ab1   (0)   813   316 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1    BE591948Tu02P026D10P026H121F1_058.ab1     1 
  440  C BE591948Tu02P026D10P026H121R1_058.ab1   666 
  458    BE591948Tu02P026D10P026H121F1_058.ab1   458 
  526  C BE591948Tu02P026D10P026H121R1_058.ab1   580 
  530    BE591948Tu02P026D10P026H121F1_058.ab1   530 
  565  C BE591948Tu02P026D10P026H121R1_058.ab1   541 
  573    BE591948Tu02P026D10P026H121F1_058.ab1   573 
  581  C BE591948Tu02P026D10P026H121R1_058.ab1   525 
  629    BE591948Tu02P026D10P026H121F1_058.ab1   629 
  633  C BE591948Tu02P026D10P026H121R1_058.ab1   473 
Contig length: old 1105, new 1105

Contig length: old 1105, new 1105
New start: 0