No. words: 1169; after pruning: 1143


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:420)  408  0.24 0.00 0.00  BE604885Ld05P129F05P129F111F1_051.ab1        1   421 (153)  C BE604885Ld05P129F05P129F111R1_051.ab1   (174)   421     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  210 nodes

 107 str. conn. components

Path
    1  C BE604885Ld05P129F05P129F111R1_051.ab1   595 
  392    BE604885Ld05P129F05P129F111F1_051.ab1   218 
  420  C BE604885Ld05P129F05P129F111R1_051.ab1   176 
  436    BE604885Ld05P129F05P129F111F1_051.ab1   262 
  448  C BE604885Ld05P129F05P129F111R1_051.ab1   148 
  464    BE604885Ld05P129F05P129F111F1_051.ab1   290 
  528  C BE604885Ld05P129F05P129F111R1_051.ab1    68 
  544    BE604885Ld05P129F05P129F111F1_051.ab1   370 
Contig length: old 748, new 748

Contig length: old 748, new 748
New start: 0