No. words: 1660; after pruning: 1620


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 16.8 (1,1:829)  779  0.12 0.00 0.00  BE604959As01P078G03P078G091F1_085.ab1       27   827 (27)  C BE604959As01P078G03P078G091R1_085.ab1   (2)   804     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  398 nodes

 201 str. conn. components

Path
    1    BE604959As01P078G03P078G091F1_085.ab1     1 
  397  C BE604959As01P078G03P078G091R1_085.ab1   434 
  413    BE604959As01P078G03P078G091F1_085.ab1   413 
  425  C BE604959As01P078G03P078G091R1_085.ab1   406 
  429    BE604959As01P078G03P078G091F1_085.ab1   429 
  441  C BE604959As01P078G03P078G091R1_085.ab1   390 
  453    BE604959As01P078G03P078G091F1_085.ab1   453 
  461  C BE604959As01P078G03P078G091R1_085.ab1   370 
  485    BE604959As01P078G03P078G091F1_085.ab1   485 
  489  C BE604959As01P078G03P078G091R1_085.ab1   342 
  533    BE604959As01P078G03P078G091F1_085.ab1   533 
  537  C BE604959As01P078G03P078G091R1_085.ab1   294 
  821    BE604959As01P078G03P078G091F1_085.ab1   821 
Contig length: old 854, new 854

Contig length: old 854, new 854
New start: 0