No. words: 1465; after pruning: 1439


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:806)  628  0.46 0.00 0.00  BE604959As02P078G03P078G091F1_083.ab1       54   711 (0)  C BE604959As02P078G03P078G091R1_083.ab1   (0)   754    97 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1    BE604959As02P078G03P078G091F1_083.ab1     1 
  163  C BE604959As02P078G03P078G091R1_083.ab1   645 
  167    BE604959As02P078G03P078G091F1_083.ab1   167 
  191  C BE604959As02P078G03P078G091R1_083.ab1   617 
  210    BE604959As02P078G03P078G091F1_083.ab1   210 
  234  C BE604959As02P078G03P078G091R1_083.ab1   574 
  238    BE604959As02P078G03P078G091F1_083.ab1   238 
  266  C BE604959As02P078G03P078G091R1_083.ab1   542 
  270    BE604959As02P078G03P078G091F1_083.ab1   270 
  334  C BE604959As02P078G03P078G091R1_083.ab1   474 
  338    BE604959As02P078G03P078G091F1_083.ab1   338 
  346  C BE604959As02P078G03P078G091R1_083.ab1   462 
  354    BE604959As02P078G03P078G091F1_083.ab1   354 
  370  C BE604959As02P078G03P078G091R1_083.ab1   438 
  374    BE604959As02P078G03P078G091F1_083.ab1   374 
  378  C BE604959As02P078G03P078G091R1_083.ab1   430 
  382    BE604959As02P078G03P078G091F1_083.ab1   382 
  386  C BE604959As02P078G03P078G091R1_083.ab1   422 
  390    BE604959As02P078G03P078G091F1_083.ab1   390 
  406  C BE604959As02P078G03P078G091R1_083.ab1   402 
  410    BE604959As02P078G03P078G091F1_083.ab1   410 
  426  C BE604959As02P078G03P078G091R1_083.ab1   382 
  438    BE604959As02P078G03P078G091F1_083.ab1   438 
  454  C BE604959As02P078G03P078G091R1_083.ab1   354 
  474    BE604959As02P078G03P078G091F1_083.ab1   474 
  478  C BE604959As02P078G03P078G091R1_083.ab1   330 
  494    BE604959As02P078G03P078G091F1_083.ab1   494 
  498  C BE604959As02P078G03P078G091R1_083.ab1   310 
  514    BE604959As02P078G03P078G091F1_083.ab1   514 
  522  C BE604959As02P078G03P078G091R1_083.ab1   286 
  558    BE604959As02P078G03P078G091F1_083.ab1   558 
  566  C BE604959As02P078G03P078G091R1_083.ab1   242 
  570    BE604959As02P078G03P078G091F1_083.ab1   570 
  582  C BE604959As02P078G03P078G091R1_083.ab1   226 
  586    BE604959As02P078G03P078G091F1_083.ab1   586 
  606  C BE604959As02P078G03P078G091R1_083.ab1   202 
  654    BE604959As02P078G03P078G091F1_083.ab1   654 
  658  C BE604959As02P078G03P078G091R1_083.ab1   150 
Contig length: old 807, new 807

Contig length: old 807, new 807
New start: 0