No. words: 1777; after pruning: 1751


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.8 (1,1:806)  782  0.00 0.12 0.00  BE604959Ld05P078G03P078G091F1_070.ab1        1   807 (63)  C BE604959Ld05P078G03P078G091R1_070.ab1   (99)   808     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  402 nodes

 203 str. conn. components

Path
    1  C BE604959Ld05P078G03P078G091R1_070.ab1   907 
  110    BE604959Ld05P078G03P078G091F1_070.ab1    10 
  178  C BE604959Ld05P078G03P078G091R1_070.ab1   730 
  182    BE604959Ld05P078G03P078G091F1_070.ab1    82 
  206  C BE604959Ld05P078G03P078G091R1_070.ab1   702 
  210    BE604959Ld05P078G03P078G091F1_070.ab1   110 
  730  C BE604959Ld05P078G03P078G091R1_070.ab1   178 
  738    BE604959Ld05P078G03P078G091F1_070.ab1   638 
  762  C BE604959Ld05P078G03P078G091R1_070.ab1   146 
  882    BE604959Ld05P078G03P078G091F1_070.ab1   782 
  886  C BE604959Ld05P078G03P078G091R1_070.ab1    22 
  894    BE604959Ld05P078G03P078G091F1_070.ab1   794 
Contig length: old 970, new 970

Contig length: old 970, new 970
New start: 0