No. words: 1797; after pruning: 1771


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 16.2 (1,1:826)  791  0.00 0.36 0.00  BE604959Ld10P078G03P078G091F1_091.ab1        4   826 (84)  C BE604959Ld10P078G03P078G091R1_091.ab1   (61)   826     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  406 nodes

 205 str. conn. components

Path
    1  C BE604959Ld10P078G03P078G091R1_091.ab1   887 
   65    BE604959Ld10P078G03P078G091F1_091.ab1     7 
   69  C BE604959Ld10P078G03P078G091R1_091.ab1   819 
   90    BE604959Ld10P078G03P078G091F1_091.ab1    29 
  710  C BE604959Ld10P078G03P078G091R1_091.ab1   178 
  862    BE604959Ld10P078G03P078G091F1_091.ab1   801 
  866  C BE604959Ld10P078G03P078G091R1_091.ab1    22 
  874    BE604959Ld10P078G03P078G091F1_091.ab1   813 
  878  C BE604959Ld10P078G03P078G091R1_091.ab1    10 
  882    BE604959Ld10P078G03P078G091F1_091.ab1   821 
Contig length: old 970, new 971

Contig length: old 971, new 971
New start: 0