No. words: 1230; after pruning: 1204


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 7.5 (1,1:582)  557  0.00 0.00 0.00  BE604959Sn25P137H05P078G091F1_015.ab1        8   577 (37)  C BE604959Sn25P137H05P078G091R1_015.ab1   (40)   576     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1  C BE604959Sn25P137H05P078G091R1_015.ab1   616 
  128    BE604959Sn25P137H05P078G091F1_015.ab1    95 
  136  C BE604959Sn25P137H05P078G091R1_015.ab1   481 
  404    BE604959Sn25P137H05P078G091F1_015.ab1   371 
  408  C BE604959Sn25P137H05P078G091R1_015.ab1   209 
  444    BE604959Sn25P137H05P078G091F1_015.ab1   411 
  468  C BE604959Sn25P137H05P078G091R1_015.ab1   149 
  512    BE604959Sn25P137H05P078G091F1_015.ab1   479 
  564  C BE604959Sn25P137H05P078G091R1_015.ab1    53 
  580    BE604959Sn25P137H05P078G091F1_015.ab1   547 
Contig length: old 647, new 647

Contig length: old 647, new 647
New start: 0