No. words: 1200; after pruning: 1174


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:549)  537  0.00 0.00 0.00  BE604959Sn28P137H05P078G091F1_009.ab1        1   550 (55)  C BE604959Sn28P137H05P078G091R1_009.ab1   (45)   550     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1  C BE604959Sn28P137H05P078G091R1_009.ab1   595 
  225    BE604959Sn28P137H05P078G091F1_009.ab1   180 
  241  C BE604959Sn28P137H05P078G091R1_009.ab1   355 
  249    BE604959Sn28P137H05P078G091F1_009.ab1   204 
  301  C BE604959Sn28P137H05P078G091R1_009.ab1   295 
  313    BE604959Sn28P137H05P078G091F1_009.ab1   268 
Contig length: old 650, new 650

Contig length: old 650, new 650
New start: 0