No. words: 1228; after pruning: 1202


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 8.9 (1,1:583)  554  0.00 0.35 0.00  BE604959Sn32P137H05P078G091F1_012.ab1        1   576 (37)  C BE604959Sn32P137H05P078G091R1_012.ab1   (30)   585     8 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C BE604959Sn32P137H05P078G091R1_012.ab1   615 
  403    BE604959Sn32P137H05P078G091F1_012.ab1   371 
  411  C BE604959Sn32P137H05P078G091R1_012.ab1   205 
  507    BE604959Sn32P137H05P078G091F1_012.ab1   475 
  543  C BE604959Sn32P137H05P078G091R1_012.ab1    73 
  551    BE604959Sn32P137H05P078G091F1_012.ab1   519 
  559  C BE604959Sn32P137H05P078G091R1_012.ab1    57 
  575    BE604959Sn32P137H05P078G091F1_012.ab1   543 
Contig length: old 644, new 645

Contig length: old 645, new 645
New start: 0