No. words: 1216; after pruning: 1190


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 12.0 (1,1:569)  550  0.00 0.00 0.00  BE604959Ta15P137H05P078G091F1_091.ab1        7   570 (40)  C BE604959Ta15P137H05P078G091R1_091.ab1   (42)   564     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C BE604959Ta15P137H05P078G091R1_091.ab1   606 
  326    BE604959Ta15P137H05P078G091F1_091.ab1   290 
Contig length: old 646, new 646

Contig length: old 646, new 646
New start: 0