No. words: 1232; after pruning: 1206


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.5 (1,1:583)  556  0.00 0.34 0.17  BE604959Ta16P137H05P078G091F1_092.ab1        1   583 (32)  C BE604959Ta16P137H05P078G091R1_092.ab1   (32)   585     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C BE604959Ta16P137H05P078G091R1_092.ab1   617 
  511    BE604959Ta16P137H05P078G091F1_092.ab1   477 
  527  C BE604959Ta16P137H05P078G091R1_092.ab1    91 
  535    BE604959Ta16P137H05P078G091F1_092.ab1   501 
  543  C BE604959Ta16P137H05P078G091R1_092.ab1    75 
  555    BE604959Ta16P137H05P078G091F1_092.ab1   521 
  559  C BE604959Ta16P137H05P078G091R1_092.ab1    59 
  579    BE604959Ta16P137H05P078G091F1_092.ab1   545 
Contig length: old 648, new 649

Contig length: old 649, new 649
New start: 0