No. words: 1218; after pruning: 1192


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 11.1 (1,1:569)  544  0.18 0.18 0.00  BE604959Ta23P137H05P078G091F1_083.ab1        7   570 (43)  C BE604959Ta23P137H05P078G091R1_083.ab1   (40)   565     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C BE604959Ta23P137H05P078G091R1_083.ab1   605 
  511    BE604959Ta23P137H05P078G091F1_083.ab1   476 
  559  C BE604959Ta23P137H05P078G091R1_083.ab1    47 
  567    BE604959Ta23P137H05P078G091F1_083.ab1   532 
  571  C BE604959Ta23P137H05P078G091R1_083.ab1    35 
  579    BE604959Ta23P137H05P078G091F1_083.ab1   544 
Contig length: old 648, new 648

Contig length: old 648, new 648
New start: 0