No. words: 1313; after pruning: 1261


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 3.9 (1,1:274)  246  1.82 0.00 0.00  BE605103At02P078H03P078H091R1_043.ab1        1   275 (47)  C BE605103At02P078H03P078H091F1_066.ab1   (57)   275     1 *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.9 (2,1:275)  308  0.30 0.30 0.00  BE605103At02P078H03P078H091F1_066.ab1        1   332 (0)    BE605103At02P078H03P078H091F1_043.ab1        2   334 (0) *
Merge:(0)    0    0.0 6.1 (3,1:-1)  260  0.00 0.00 0.00  BE605103At02P078H03P078H091F1_066.ab1        1   276 (56)  C BE605103At02P078H03P078H091R1_066.ab1   (49)   276     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       5 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    4    1

Chimera merges: 


Contig 1:  822 nodes

 192 str. conn. components

Path
    1  C BE605103At02P078H03P078H091F1_066.ab1   332 
  101    BE605103At02P078H03P078H091R1_066.ab1    45 
  107  C BE605103At02P078H03P078H091F1_066.ab1   226 
  163    BE605103At02P078H03P078H091R1_066.ab1   107 
  171  C BE605103At02P078H03P078H091F1_066.ab1   162 
  184    BE605103At02P078H03P078H091R1_066.ab1   128 
  216  C BE605103At02P078H03P078H091F1_066.ab1   117 
  220    BE605103At02P078H03P078H091R1_066.ab1   164 
  260  C BE605103At02P078H03P078H091F1_066.ab1    73 
  264    BE605103At02P078H03P078H091R1_066.ab1   208 
  296  C BE605103At02P078H03P078H091F1_066.ab1    37 
  300    BE605103At02P078H03P078H091R1_066.ab1   244 
Contig length: old 382, new 381

Contig length: old 381, new 381
New start: 0