No. words: 882; after pruning: 856


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.9 (1,1:279)  259  0.00 0.36 0.00  BE605103Ld03P078H03P078H091F1_054.ab1        1   280 (173)  C BE605103Ld03P078H03P078H091R1_054.ab1   (148)   281     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1  C BE605103Ld03P078H03P078H091R1_054.ab1   429 
  301    BE605103Ld03P078H03P078H091F1_054.ab1   152 
Contig length: old 602, new 602

Contig length: old 602, new 602
New start: 0