No. words: 991; after pruning: 965


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.9 (1,1:335)  316  0.00 0.30 0.30  BE636913Ld01P078B04P078B101F1_077.ab1        1   336 (145)  C BE636913Ld01P078B04P078B101R1_077.ab1   (174)   336     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  164 nodes

 84 str. conn. components

Path
    1  C BE636913Ld01P078B04P078B101R1_077.ab1   510 
  338    BE636913Ld01P078B04P078B101F1_077.ab1   163 
Contig length: old 655, new 656

Contig length: old 656, new 656
New start: 0