No. words: 1367; after pruning: 1341


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:560)  552  0.00 0.00 0.00  BE636979Ln07P003F05F111F1_11.ab1        1   561 (123)  C BE636979Ln07P003F05F111R1_11.ab1   (122)   561     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1  C BE636979Ln07P003F05F111R1_11.ab1   683 
  133    BE636979Ln07P003F05F111F1_11.ab1    11 
  141  C BE636979Ln07P003F05F111R1_11.ab1   543 
  145    BE636979Ln07P003F05F111F1_11.ab1    23 
  385  C BE636979Ln07P003F05F111R1_11.ab1   299 
  465    BE636979Ln07P003F05F111F1_11.ab1   343 
  473  C BE636979Ln07P003F05F111R1_11.ab1   211 
  481    BE636979Ln07P003F05F111F1_11.ab1   359 
  485  C BE636979Ln07P003F05F111R1_11.ab1   199 
  537    BE636979Ln07P003F05F111F1_11.ab1   415 
  545  C BE636979Ln07P003F05F111R1_11.ab1   139 
  661    BE636979Ln07P003F05F111F1_11.ab1   539 
  673  C BE636979Ln07P003F05F111R1_11.ab1    11 
  677    BE636979Ln07P003F05F111F1_11.ab1   555 
Contig length: old 806, new 806

Contig length: old 806, new 806
New start: 0