No. words: 1357; after pruning: 1331


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:559)  551  0.00 0.00 0.00  BE636979Ln08P003F05F111F1_12.ab1        1   560 (132)  C BE636979Ln08P003F05F111R1_12.ab1   (105)   560     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1  C BE636979Ln08P003F05F111R1_12.ab1   665 
  124    BE636979Ln08P003F05F111F1_12.ab1    19 
  144  C BE636979Ln08P003F05F111R1_12.ab1   522 
  148    BE636979Ln08P003F05F111F1_12.ab1    43 
  152  C BE636979Ln08P003F05F111R1_12.ab1   514 
  156    BE636979Ln08P003F05F111F1_12.ab1    51 
  204  C BE636979Ln08P003F05F111R1_12.ab1   462 
  212    BE636979Ln08P003F05F111F1_12.ab1   107 
  216  C BE636979Ln08P003F05F111R1_12.ab1   450 
  240    BE636979Ln08P003F05F111F1_12.ab1   135 
  252  C BE636979Ln08P003F05F111R1_12.ab1   414 
  304    BE636979Ln08P003F05F111F1_12.ab1   199 
  308  C BE636979Ln08P003F05F111R1_12.ab1   358 
  652    BE636979Ln08P003F05F111F1_12.ab1   547 
  656  C BE636979Ln08P003F05F111R1_12.ab1    10 
  660    BE636979Ln08P003F05F111F1_12.ab1   555 
Contig length: old 797, new 797

Contig length: old 797, new 797
New start: 0