No. words: 1197; after pruning: 1171


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.7 (1,1:573)  565  0.00 0.00 0.00  BE636979Tu01P003F05F111F1_11.ab1        1   574 (26)  C BE636979Tu01P003F05F111R1_11.ab1   (23)   574     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C BE636979Tu01P003F05F111R1_11.ab1   597 
   27    BE636979Tu01P003F05F111F1_11.ab1     4 
   39  C BE636979Tu01P003F05F111R1_11.ab1   559 
   43    BE636979Tu01P003F05F111F1_11.ab1    20 
  263  C BE636979Tu01P003F05F111R1_11.ab1   335 
  339    BE636979Tu01P003F05F111F1_11.ab1   316 
  439  C BE636979Tu01P003F05F111R1_11.ab1   159 
  579    BE636979Tu01P003F05F111F1_11.ab1   556 
Contig length: old 623, new 623

Contig length: old 623, new 623
New start: 0