No. words: 1140; after pruning: 1114


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:400)  381  0.00 0.25 0.25  BE636993Ld03P027B01P027B071F1_008.ab1        1   401 (173)  C BE636993Ld03P027B01P027B071R1_008.ab1   (165)   401     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  196 nodes

 100 str. conn. components

Path
    1  C BE636993Ld03P027B01P027B071R1_008.ab1   566 
  465    BE636993Ld03P027B01P027B071F1_008.ab1   300 
Contig length: old 739, new 739

Contig length: old 739, new 739
New start: 0