No. words: 1144; after pruning: 1118


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:420)  397  0.00 0.24 0.47  BE636993Ld05P027B01P027B071F1_004.ab1        1   422 (134)  C BE636993Ld05P027B01P027B071R1_004.ab1   (167)   421     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  202 nodes

 103 str. conn. components

Path
    1  C BE636993Ld05P027B01P027B071R1_004.ab1   588 
  401    BE636993Ld05P027B01P027B071F1_004.ab1   233 
  409  C BE636993Ld05P027B01P027B071R1_004.ab1   180 
  413    BE636993Ld05P027B01P027B071F1_004.ab1   245 
  425  C BE636993Ld05P027B01P027B071R1_004.ab1   164 
  433    BE636993Ld05P027B01P027B071F1_004.ab1   265 
  437  C BE636993Ld05P027B01P027B071R1_004.ab1   152 
  441    BE636993Ld05P027B01P027B071F1_004.ab1   273 
  445  C BE636993Ld05P027B01P027B071R1_004.ab1   144 
  461    BE636993Ld05P027B01P027B071F1_004.ab1   293 
  469  C BE636993Ld05P027B01P027B071R1_004.ab1   120 
  473    BE636993Ld05P027B01P027B071F1_004.ab1   305 
  481  C BE636993Ld05P027B01P027B071R1_004.ab1   108 
  485    BE636993Ld05P027B01P027B071F1_004.ab1   317 
  489  C BE636993Ld05P027B01P027B071R1_004.ab1   100 
  505    BE636993Ld05P027B01P027B071F1_004.ab1   337 
Contig length: old 723, new 724

Contig length: old 724, new 724
New start: 0