No. words: 1195; after pruning: 1169


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.9 (1,1:434)  427  0.23 0.00 0.00  BE637668Ld01P129H05P129H111F1_079.ab1        5   435 (183)  C BE637668Ld01P129H05P129H111R1_079.ab1   (146)   431     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  214 nodes

 109 str. conn. components

Path
    1  C BE637668Ld01P129H05P129H111R1_079.ab1   577 
  198    BE637668Ld01P129H05P129H111F1_079.ab1    56 
  206  C BE637668Ld01P129H05P129H111R1_079.ab1   372 
  238    BE637668Ld01P129H05P129H111F1_079.ab1    96 
  242  C BE637668Ld01P129H05P129H111R1_079.ab1   336 
  274    BE637668Ld01P129H05P129H111F1_079.ab1   132 
  282  C BE637668Ld01P129H05P129H111R1_079.ab1   296 
  290    BE637668Ld01P129H05P129H111F1_079.ab1   148 
  298  C BE637668Ld01P129H05P129H111R1_079.ab1   280 
  354    BE637668Ld01P129H05P129H111F1_079.ab1   212 
  358  C BE637668Ld01P129H05P129H111R1_079.ab1   220 
  378    BE637668Ld01P129H05P129H111F1_079.ab1   236 
  382  C BE637668Ld01P129H05P129H111R1_079.ab1   196 
  394    BE637668Ld01P129H05P129H111F1_079.ab1   252 
  398  C BE637668Ld01P129H05P129H111R1_079.ab1   180 
  414    BE637668Ld01P129H05P129H111F1_079.ab1   272 
  418  C BE637668Ld01P129H05P129H111R1_079.ab1   160 
  430    BE637668Ld01P129H05P129H111F1_079.ab1   288 
  438  C BE637668Ld01P129H05P129H111R1_079.ab1   140 
  446    BE637668Ld01P129H05P129H111F1_079.ab1   304 
  462  C BE637668Ld01P129H05P129H111R1_079.ab1   116 
  470    BE637668Ld01P129H05P129H111F1_079.ab1   328 
  478  C BE637668Ld01P129H05P129H111R1_079.ab1   100 
  490    BE637668Ld01P129H05P129H111F1_079.ab1   348 
Contig length: old 760, new 760

Contig length: old 760, new 760
New start: 0