No. words: 1193; after pruning: 1167


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 9.0 (1,1:436)  430  0.00 0.00 0.00  BE637668Ld03P129H05P129H111F1_075.ab1        7   437 (154)  C BE637668Ld03P129H05P129H111R1_075.ab1   (171)   431     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  218 nodes

 111 str. conn. components

Path
    1  C BE637668Ld03P129H05P129H111R1_075.ab1   602 
  223    BE637668Ld03P129H05P129H111F1_075.ab1    58 
  235  C BE637668Ld03P129H05P129H111R1_075.ab1   368 
  263    BE637668Ld03P129H05P129H111F1_075.ab1    98 
  267  C BE637668Ld03P129H05P129H111R1_075.ab1   336 
  315    BE637668Ld03P129H05P129H111F1_075.ab1   150 
  323  C BE637668Ld03P129H05P129H111R1_075.ab1   280 
  359    BE637668Ld03P129H05P129H111F1_075.ab1   194 
  367  C BE637668Ld03P129H05P129H111R1_075.ab1   236 
  379    BE637668Ld03P129H05P129H111F1_075.ab1   214 
  383  C BE637668Ld03P129H05P129H111R1_075.ab1   220 
  419    BE637668Ld03P129H05P129H111F1_075.ab1   254 
  427  C BE637668Ld03P129H05P129H111R1_075.ab1   176 
  455    BE637668Ld03P129H05P129H111F1_075.ab1   290 
  463  C BE637668Ld03P129H05P129H111R1_075.ab1   140 
  475    BE637668Ld03P129H05P129H111F1_075.ab1   310 
  487  C BE637668Ld03P129H05P129H111R1_075.ab1   116 
  515    BE637668Ld03P129H05P129H111F1_075.ab1   350 
Contig length: old 756, new 756

Contig length: old 756, new 756
New start: 0