No. words: 1193; after pruning: 1167


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.0 (1,1:434)  430  0.00 0.00 0.00  BE637668Ld07P129H05P129H111F1_067.ab1        5   435 (183)  C BE637668Ld07P129H05P129H111R1_067.ab1   (144)   431     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  218 nodes

 111 str. conn. components

Path
    1  C BE637668Ld07P129H05P129H111R1_067.ab1   575 
  196    BE637668Ld07P129H05P129H111F1_067.ab1    56 
  200  C BE637668Ld07P129H05P129H111R1_067.ab1   376 
  236    BE637668Ld07P129H05P129H111F1_067.ab1    96 
  240  C BE637668Ld07P129H05P129H111R1_067.ab1   336 
  260    BE637668Ld07P129H05P129H111F1_067.ab1   120 
  272  C BE637668Ld07P129H05P129H111R1_067.ab1   304 
  288    BE637668Ld07P129H05P129H111F1_067.ab1   148 
  296  C BE637668Ld07P129H05P129H111R1_067.ab1   280 
  336    BE637668Ld07P129H05P129H111F1_067.ab1   196 
  344  C BE637668Ld07P129H05P129H111R1_067.ab1   232 
  352    BE637668Ld07P129H05P129H111F1_067.ab1   212 
  360  C BE637668Ld07P129H05P129H111R1_067.ab1   216 
  392    BE637668Ld07P129H05P129H111F1_067.ab1   252 
  396  C BE637668Ld07P129H05P129H111R1_067.ab1   180 
  428    BE637668Ld07P129H05P129H111F1_067.ab1   288 
  436  C BE637668Ld07P129H05P129H111R1_067.ab1   140 
  444    BE637668Ld07P129H05P129H111F1_067.ab1   304 
  464  C BE637668Ld07P129H05P129H111R1_067.ab1   112 
  468    BE637668Ld07P129H05P129H111F1_067.ab1   328 
  520  C BE637668Ld07P129H05P129H111R1_067.ab1    56 
  524    BE637668Ld07P129H05P129H111F1_067.ab1   384 
Contig length: old 758, new 758

Contig length: old 758, new 758
New start: 0