No. words: 1184; after pruning: 1158


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:426)  407  1.17 0.23 0.00  BE637668Ld11P129H05P129H111F1_076.ab1        1   427 (184)  C BE637668Ld11P129H05P129H111R1_076.ab1   (145)   428     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1  C BE637668Ld11P129H05P129H111R1_076.ab1   573 
  288    BE637668Ld11P129H05P129H111F1_076.ab1   142 
  296  C BE637668Ld11P129H05P129H111R1_076.ab1   278 
  312    BE637668Ld11P129H05P129H111F1_076.ab1   166 
  316  C BE637668Ld11P129H05P129H111R1_076.ab1   258 
  328    BE637668Ld11P129H05P129H111F1_076.ab1   182 
  332  C BE637668Ld11P129H05P129H111R1_076.ab1   242 
  336    BE637668Ld11P129H05P129H111F1_076.ab1   190 
  344  C BE637668Ld11P129H05P129H111R1_076.ab1   230 
  352    BE637668Ld11P129H05P129H111F1_076.ab1   206 
  356  C BE637668Ld11P129H05P129H111R1_076.ab1   218 
  364    BE637668Ld11P129H05P129H111F1_076.ab1   218 
  368  C BE637668Ld11P129H05P129H111R1_076.ab1   206 
  392    BE637668Ld11P129H05P129H111F1_076.ab1   246 
  396  C BE637668Ld11P129H05P129H111R1_076.ab1   178 
  428    BE637668Ld11P129H05P129H111F1_076.ab1   282 
  436  C BE637668Ld11P129H05P129H111R1_076.ab1   138 
  448    BE637668Ld11P129H05P129H111F1_076.ab1   302 
  460  C BE637668Ld11P129H05P129H111R1_076.ab1   114 
  468    BE637668Ld11P129H05P129H111F1_076.ab1   322 
Contig length: old 757, new 757

Contig length: old 757, new 757
New start: 0