No. words: 1194; after pruning: 1168


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 8.9 (1,1:436)  430  0.00 0.00 0.00  BE637668Ld12P129H05P129H111F1_074.ab1        7   437 (182)  C BE637668Ld12P129H05P129H111R1_074.ab1   (144)   431     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  218 nodes

 111 str. conn. components

Path
    1  C BE637668Ld12P129H05P129H111R1_074.ab1   575 
  196    BE637668Ld12P129H05P129H111F1_074.ab1    58 
  200  C BE637668Ld12P129H05P129H111R1_074.ab1   376 
  288    BE637668Ld12P129H05P129H111F1_074.ab1   150 
  296  C BE637668Ld12P129H05P129H111R1_074.ab1   280 
  324    BE637668Ld12P129H05P129H111F1_074.ab1   186 
  328  C BE637668Ld12P129H05P129H111R1_074.ab1   248 
  332    BE637668Ld12P129H05P129H111F1_074.ab1   194 
  340  C BE637668Ld12P129H05P129H111R1_074.ab1   236 
  352    BE637668Ld12P129H05P129H111F1_074.ab1   214 
  356  C BE637668Ld12P129H05P129H111R1_074.ab1   220 
  384    BE637668Ld12P129H05P129H111F1_074.ab1   246 
  388  C BE637668Ld12P129H05P129H111R1_074.ab1   188 
  392    BE637668Ld12P129H05P129H111F1_074.ab1   254 
  400  C BE637668Ld12P129H05P129H111R1_074.ab1   176 
  428    BE637668Ld12P129H05P129H111F1_074.ab1   290 
  436  C BE637668Ld12P129H05P129H111R1_074.ab1   140 
  444    BE637668Ld12P129H05P129H111F1_074.ab1   306 
  460  C BE637668Ld12P129H05P129H111R1_074.ab1   116 
  468    BE637668Ld12P129H05P129H111F1_074.ab1   330 
  524  C BE637668Ld12P129H05P129H111R1_074.ab1    52 
  532    BE637668Ld12P129H05P129H111F1_074.ab1   394 
Contig length: old 757, new 757

Contig length: old 757, new 757
New start: 0