No. words: 276; after pruning: 250


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -2.3 -2.3 (1,1:55)   42  5.45 1.82 0.00  BE637668Td02P146H09P129H111F1_048.ab1        2    56 (110)  C BE637668Td02P146H09P129H111R1_048.ab1   (54)    56     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.3       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  20 nodes

 12 str. conn. components

Path
    1  C BE637668Td02P146H09P129H111R1_048.ab1   110 
   85    BE637668Td02P146H09P129H111F1_048.ab1    31 
   97  C BE637668Td02P146H09P129H111R1_048.ab1    14 
  105    BE637668Td02P146H09P129H111F1_048.ab1    51 
Contig length: old 220, new 220

Contig length: old 220, new 220
New start: 0 
S Change at: 74; seg lengths: entry 1, contig 1
S Change at: 79; seg lengths: entry 3, contig 3