No. words: 299; after pruning: 273


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    3   -0.5 -0.5 (1,1:83)   53  7.50 1.25 1.25  BE637668Td04P146H09P129H111F1_046.ab1        4    83 (68)  C BE637668Td04P146H09P129H111R1_046.ab1   (68)    80     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.5       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  24 nodes

 14 str. conn. components

Path
    1  C BE637668Td04P146H09P129H111R1_046.ab1   148 
   72    BE637668Td04P146H09P129H111F1_046.ab1     7 
   92  C BE637668Td04P146H09P129H111R1_046.ab1    57 
  126    BE637668Td04P146H09P129H111F1_046.ab1    61 
Contig length: old 215, new 216

Contig length: old 216, new 216
New start: 0 
I Change at: 115; seg lengths: entry 1, contig 0
D Change at: 120; seg lengths: entry 3, contig 4
S Change at: 141; seg lengths: entry 1, contig 1