No. words: 1714; after pruning: 1688


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.5 (1,1:1552)  156  0.00 0.00 0.00  BE637789Ld10P078D04P078D101F1_080.ab1      746   906 (0)  C BE637789Ld10P078D04P078D101R1_080.ab1   (0)   808   648 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  82 nodes

 43 str. conn. components

Path
    1    BE637789Ld10P078D04P078D101F1_080.ab1     1 
  749  C BE637789Ld10P078D04P078D101R1_080.ab1   805 
  761    BE637789Ld10P078D04P078D101F1_080.ab1   761 
  769  C BE637789Ld10P078D04P078D101R1_080.ab1   785 
  777    BE637789Ld10P078D04P078D101F1_080.ab1   777 
  781  C BE637789Ld10P078D04P078D101R1_080.ab1   773 
  785    BE637789Ld10P078D04P078D101F1_080.ab1   785 
  793  C BE637789Ld10P078D04P078D101R1_080.ab1   761 
Contig length: old 1553, new 1553

Contig length: old 1553, new 1553
New start: 0