No. words: 1067; after pruning: 1041


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.9 (1,1:499)  484  0.00 0.40 0.00  BE637806As02P027C01P027C071F1_069.ab1        2   495 (38)  C BE637806As02P027C01P027C071R1_069.ab1   (34)   500     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE637806As02P027C01P027C071R1_069.ab1   534 
   87    BE637806As02P027C01P027C071F1_069.ab1    52 
  111  C BE637806As02P027C01P027C071R1_069.ab1   424 
  115    BE637806As02P027C01P027C071F1_069.ab1    80 
  119  C BE637806As02P027C01P027C071R1_069.ab1   416 
  139    BE637806As02P027C01P027C071F1_069.ab1   104 
  147  C BE637806As02P027C01P027C071R1_069.ab1   388 
  151    BE637806As02P027C01P027C071F1_069.ab1   116 
  211  C BE637806As02P027C01P027C071R1_069.ab1   324 
  219    BE637806As02P027C01P027C071F1_069.ab1   184 
  223  C BE637806As02P027C01P027C071R1_069.ab1   312 
  399    BE637806As02P027C01P027C071F1_069.ab1   364 
  407  C BE637806As02P027C01P027C071R1_069.ab1   128 
  423    BE637806As02P027C01P027C071F1_069.ab1   388 
Contig length: old 567, new 568

Contig length: old 568, new 568
New start: 0