No. words: 1285; after pruning: 1259


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (1,1:478)  457  1.05 0.21 0.00  BE637806Ld01P027C01P027C071F1_095.ab1        2   479 (176)  C BE637806Ld01P027C01P027C071R1_095.ab1   (151)   479     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BE637806Ld01P027C01P027C071R1_095.ab1   630 
  249    BE637806Ld01P027C01P027C071F1_095.ab1    98 
  289  C BE637806Ld01P027C01P027C071R1_095.ab1   342 
  473    BE637806Ld01P027C01P027C071F1_095.ab1   322 
Contig length: old 806, new 806

Contig length: old 806, new 806
New start: 0