No. words: 1309; after pruning: 1283


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   10    0.0 8.8 (1,1:501)  486  0.00 0.00 0.00  BE637806Ld03P027C01P027C071F1_091.ab1       11   498 (138)  C BE637806Ld03P027C01P027C071R1_091.ab1   (181)   492     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
10       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BE637806Ld03P027C01P027C071R1_091.ab1   673 
  293    BE637806Ld03P027C01P027C071F1_091.ab1   122 
  317  C BE637806Ld03P027C01P027C071R1_091.ab1   357 
  537    BE637806Ld03P027C01P027C071F1_091.ab1   366 
  605  C BE637806Ld03P027C01P027C071R1_091.ab1    69 
  617    BE637806Ld03P027C01P027C071F1_091.ab1   446 
  641  C BE637806Ld03P027C01P027C071R1_091.ab1    33 
  645    BE637806Ld03P027C01P027C071F1_091.ab1   474 
Contig length: old 807, new 807

Contig length: old 807, new 807
New start: 0