No. words: 1281; after pruning: 1255


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 7.4 (1,1:484)  479  0.00 0.00 0.00  BE637806Ld04P027C01P027C071F1_089.ab1        1   481 (136)  C BE637806Ld04P027C01P027C071R1_089.ab1   (179)   485     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE637806Ld04P027C01P027C071R1_089.ab1   664 
  283    BE637806Ld04P027C01P027C071F1_089.ab1   104 
  307  C BE637806Ld04P027C01P027C071R1_089.ab1   358 
  527    BE637806Ld04P027C01P027C071F1_089.ab1   348 
  599  C BE637806Ld04P027C01P027C071R1_089.ab1    66 
  607    BE637806Ld04P027C01P027C071F1_089.ab1   428 
Contig length: old 796, new 796

Contig length: old 796, new 796
New start: 0