No. words: 1299; after pruning: 1273


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.8 (1,1:491)  481  0.00 0.21 0.00  BE637806Ld05P027C01P027C071F1_087.ab1        2   488 (138)  C BE637806Ld05P027C01P027C071R1_087.ab1   (181)   492     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE637806Ld05P027C01P027C071R1_087.ab1   673 
  251    BE637806Ld05P027C01P027C071F1_087.ab1    70 
  259  C BE637806Ld05P027C01P027C071R1_087.ab1   415 
  539    BE637806Ld05P027C01P027C071F1_087.ab1   358 
Contig length: old 807, new 807

Contig length: old 807, new 807
New start: 0